BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005A01SP1|AL425305
(917 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1793 1774 0.0
>3x_Contig1793
Length = 40499
Score = 1774 bits (888), Expect = 0.0
Identities = 905/916 (98%), Gaps = 1/916 (0%)
Strand = Plus / Minus
Query: 3 tcacggttcggaggagcaggctgtcagtcctttgtctcctcgctcgtatccatctcctcg 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3894 tcacggttcggaggagcaggctgtcagtcctttgtctcctcgctcgtatccatctcctcg 3835
Query: 63 cagcaacagcagtagtagctgcgaagagagtcaatcctcagctggggttctagctaacat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3834 cagcaacagcagtagtagctgcgaagagagtcaatcctcagctggggttctagctaacat 3775
Query: 123 tcataccggaccggcttcccctcatggaaaggcatgtgttgcgtcttcacccctttccac 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3774 tcataccggaccggcttcccctcatggaaaggcatgtgttgcgtcttcacccctttccac 3715
Query: 183 cactggtatgagatctgcctctacgccttctagctctgacgaagatactgttcatttgca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3714 cactggtatgagatctgcctctacgccttctagctctgacgaagatactgttcatttgca 3655
Query: 243 ccgctgccaatggaaaggctgtagtttggagttcacttctcccgaactactttatcatca 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3654 ccgctgccaatggaaaggctgtagtttggagttcacttctcccgaactactttatcatca 3595
Query: 303 tctttgccaagatcatgttggccgtaaatcacagaagaatttgcaactgaactgtcaatg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3594 tctttgccaagatcatgttggccgtaaatcacagaagaatttgcaactgaactgtcaatg 3535
Query: 363 gggcgattgtcagactaaaacagttaaaagagaccatatcacgtctcatttgagagttca 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3534 gggcgattgtcagactaaaacagttaaaagagaccatatcacgtctcatttgagagttca 3475
Query: 423 tgtgcmattaamacctttcgcttgctccacttgtaataaaamattcaaaagacctcaaga 482
||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 3474 tgtgcaattaaaacctttcgcttgctccacttgtaataaaaaattcaaaagacctcaaga 3415
Query: 483 tttaaagaaacatttgaaggtacataacgaagaactttcactactg-aaaaamaaacgtg 541
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 3414 tttaaagaaacatttgaaggtacataacgaagaactttcactactgaaaaaaaaaacgtg 3355
Query: 542 gtccgaagccatccaataagctgggaaagatttcaaatgacagatcccgtgctcatcaga 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3354 gtccgaagccatccaataagctgggaaagatttcaaatgacagatcccgtgctcatcaga 3295
Query: 602 gattcactttaccatctatttctttggataaatttattcacgaggaggtgaagactcaac 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3294 gattcactttaccatctatttctttggataaatttattcacgaggaggtgaagactcaac 3235
Query: 662 aacccgtgtactctcaamaattggcagaaaagatggccatcgtcctgctgttacctgtta 721
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3234 aacccgtgtactctcaacaattggcagaaaagatggccatcgtcctgctgttacctgtta 3175
Query: 722 ataacaacaacgcaacttcccctccttctgcgtcttctgcttcgtccactgcagtttccc 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3174 ataacaacaacgcaacttcccctccttctgcgtcttctgcttcgtccactgcagtttccc 3115
Query: 782 cgaacttggtatcgcaccatatggttcttccttammaaamccagcaamgtcctctcgtgg 841
|||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 3114 cgaacttggtatcgcaccatatggttcttccttaccaaacccagcaacgtcctctcgtgg 3055
Query: 842 gtcacggtgctgaattgagatccgctgttggattcttcaataatttatccatggatatgt 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3054 gtcacggtgctgaattgagatccgctgttggattcttcaataatttatccatggatatgt 2995
Query: 902 ctagaaamtatgctaa 917
||||||| ||||||||
Sbjct: 2994 ctagaaactatgctaa 2979
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5487
Number of Sequences: 1807
Number of extensions: 5487
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 917
length of database: 10,358,551
effective HSP length: 16
effective length of query: 901
effective length of database: 10,329,639
effective search space: 9307004739
effective search space used: 9307004739
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)